backward-traceability
Skill9 starsChanged 6 months agoMITView on GitHub
Make every number in the final PDF traceable to the exact code line that produced it. Uses \hypertarget/\hyperlink LaTeX commands and \num{formula} evaluated at compile time. Use for reproducibility and data integrity verification.
3 other projects use a version of this, 3 of them edited.
Adopted by
Most recently taken up by
- willlee1995/skillsedited, first seen Oct 13, 2026
- dongzhigang13305312738-art/paper-skillsedited, first seen Jul 21, 2026
- lingzhi227/agent-research-skillsedited, first seen Feb 20, 2026
Other versions3 projects use a version of this.
Word for word · 0
None found.
Edited · 3
- lingzhi227/agent-research-skills★ 35098% same
- dongzhigang13305312738-art/paper-skills★ 198% same
- willlee1995/skills★ 198% same
Wrote their own version · 0
None found.
How matches are found. Word for word: the exact same text. Edited: shares passages with this file (“99% same” means 99% of its five-word phrases also appear here; 10% or more counts). Their own version: similar meaning, or, weakest, the same name. We can’t tell which project had it first. Projects are counted among the 200 most-starred candidates, and mentions are links to the repository we found, up to 50 per site, so both counts are a floor.
In this repository164 other files it gives its agents.
- AGENTS.mdAGENTS.md
- .codex/AGENTS.mdAGENTS.md
- agents/CLAUDE.mdCLAUDE.md
- CLAUDE.mdCLAUDE.md
- claude-md/CLAUDE.mdCLAUDE.md
- hooks/CLAUDE.mdCLAUDE.md
- insight-architectSkill
- agent-teamsSkill
- brainstormingSkill
- claim-decomposerSkill
- context-engineeringSkill
- dispatcherSkill
- git-worktreesSkill
- hd-mavp-routerSkill
- mentor-modeSkill
- reference-registrySkill
- routing-policySkill
- skill-self-updateSkill
- tdd-workflowSkill
- ab-testSkill
- academic-researchSkill
- advanced-methodology-extensionsSkill
- agent-governanceSkill
- ai-hyp-gateSkill
- algorithm-designSkill
- analystSkill
- archcode-genomicsSkill
- arm-cortex-microcontrollersSkill
- atomizeSkill
- boyko-constraint-engineSkill
- boyko-epistemic-auditSkill
- boyko-goal-expansion-100Skill
- boyko-knowledge-architectureSkill
- boyko-leverage-mapSkill
- boyko-methodSkill
- boyko-preflightSkill
- boyko-project-radarSkill
- boyko-rippleSkill
- boyko-scientific-consortiumSkill
- boyko-specialistSkill
- boyko-toolcheckSkill
- boyko-triangle-auditSkill
- boyko-why-ladderSkill
- browser-actSkill
- build-autoSkill
- c4-architectureSkill
- career-prepSkill
- changelog-genSkill
- citation-managementSkill
- code-debuggingSkill
- code-materialitySkill
- codex-skepticSkill
- codex-solverSkill
- codex-tracySkill
- combinatorial-creativitySkill
- common-groundSkill
- conductorSkill
- consilienceSkill
- construct-measurement-gateSkill
- convertSkill
- The first 60 shown.
The file
We split this skill into the rules it gives an agent
8 rules. 3 are common, 0 are distinctive, and 5 are very specific to this project.
3
Common
Most of the 3 edited versions we read keep these.
0
Distinctive
This author's own choices. Worth a look.
5
Very specific
Tied to their project's names, files or tools. Probably skip.
- Common
- Distinctive
- Very specific
- Very specific: line 53
Use \hyperlink to create clickable references in the paper:
- Very specific: line 69
Create an appendix with the full code listing, with \hypertarget anchors at relevant lines:
- Very specific: line 80
Every number in the paper text must have a corresponding \hypertarget in the code
- Very specific: line 81
Every \num{} formula must evaluate correctly
- Common: line 94
Every numeric result in the paper MUST trace to code output
- Common: line 95
Never manually type numbers — always reference tagged outputs
- Very specific: line 96
Use \num{} for any derived/computed values
- Common: line 98
Verify all hyperlinks resolve correctly after compilation
“Common” is measured: kept by at least 6 in 10 of the 3 edited versions of this file we could read. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.
Files
Backward Traceability
Make every number in the final PDF hyperlink back to the exact code line that produced it.
Input
$0— Paper project directory containing code and LaTeX files
References
- Traceability patterns and LaTeX commands:
~/.claude/skills/backward-traceability/references/traceability-patterns.md
Scripts
Scan hypertarget/hyperlink references
python ~/.claude/skills/backward-traceability/scripts/ref_numeric_values.py \
--scan paper/main.tex --output report.jsonReports: all hypertargets, hyperlinks, orphan references, unreferenced numeric values.
Verify cross-reference integrity
python ~/.claude/skills/backward-traceability/scripts/ref_numeric_values.py \
--verify paper/main.tex --code-output results.txtCross-checks values between paper text and code output. Reports mismatches.
Workflow
Step 1: Tag Code Outputs
For every numeric value produced by experiment code, add hypertarget tags:
# In experiment code output:
print(f"\\hypertarget{{R1a}}{{45.3}}") # Mean accuracy
print(f"\\hypertarget{{R1b}}{{2.1}}") # Std deviationLabel format: {prefix}{line_number}{letter} where letter = a, b, c... for multiple values on same line.
Step 2: Reference in Paper Text
Use \hyperlink to create clickable references in the paper:
Our method achieves \hyperlink{R1a}{45.3}\% accuracy
($\pm$\hyperlink{R1b}{2.1}).Step 3: Use \num for Computed Values
For values derived from other values, use \num{} for compile-time evaluation:
% \num{formula, "explanation"} → evaluated at compile time
The improvement is \num{45.3 - 38.7, "accuracy gain"}\%.Step 4: Generate Appendix Code Listing
Create an appendix with the full code listing, with \hypertarget anchors at relevant lines:
\section*{Appendix: Code Listing}
\begin{lstlisting}[escapechar=@]
@\hypertarget{code1}{}@result = model.evaluate(test_data)
@\hypertarget{code2}{}@accuracy = result['accuracy']
\end{lstlisting}Step 5: Verify Traceability
- Every number in the paper text must have a corresponding
\hypertargetin the code - Every
\num{}formula must evaluate correctly - Click-test: every hyperlink in the PDF must jump to the correct code line
LaTeX Setup
Required packages:
\usepackage{hyperref}
\usepackage{listings}Rules
- Every numeric result in the paper MUST trace to code output
- Never manually type numbers — always reference tagged outputs
- Use
\num{}for any derived/computed values - Code listing in appendix must match actual executed code
- Verify all hyperlinks resolve correctly after compilation
Related Skills
- Upstream: experiment-code, data-analysis
- Downstream: paper-compilation
- See also: paper-assembly
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