Codomyrmex
Skill10 starsChanged 38 days agoMITView on GitHub
Full-spectrum coding workspace skill providing 627 production MCP `@mcp_tool` lines across 130 top-level modules; the complete locked dependency profile currently exposes 612 tools in the merged runtime manifest. USE WHEN user says 'verify codomyrmex', 'codomyrmexVerify', 'audit codomyrmex', 'trust codomyrmex', 'codomyrmexTrust', 'trust tools', 'enable destructive tools', 'check pai status', 'codomyrmex tools', 'codomyrmex analyze', 'codomyrmex search', 'codomyrmex memory', 'codomyrmex docs', 'codomyrmex status', 'codomyrmex git', 'codomyrmex security', 'codomyrmex ai', 'codomyrmex code', 'codomyrmex data', 'codomyrmex deploy', 'codomyrmex test', or uses any 'codomyrmex' automation tools.
In this repository47 other files it gives its agents.
- .agent/AGENTS.mdAGENTS.md
- .agents/AGENTS.mdAGENTS.md
- AGENTS.mdAGENTS.md
- .agents/skills/agent-interop/AGENTS.mdAGENTS.md
- .agents/skills/AGENTS.mdAGENTS.md
- .agents/skills/first-principles/AGENTS.mdAGENTS.md
- .agents/skills/mcp-tool-use/AGENTS.mdAGENTS.md
- .agents/skills/red-team/AGENTS.mdAGENTS.md
- .agents/skills/systems-thinking/AGENTS.mdAGENTS.md
- .codex/AGENTS.mdAGENTS.md
- config/AGENTS.mdAGENTS.md
- .cursor/skills/AGENTS.mdAGENTS.md
- .cursor/skills/codomyrmex/AGENTS.mdAGENTS.md
- .cursor/skills/desloppify/AGENTS.mdAGENTS.md
- .cursor/skills/fractals/AGENTS.mdAGENTS.md
- data/AGENTS.mdAGENTS.md
- .devcontainer/AGENTS.mdAGENTS.md
- docs/AGENTS.mdAGENTS.md
- evaluations/AGENTS.mdAGENTS.md
- examples/AGENTS.mdAGENTS.md
- .github/AGENTS.mdAGENTS.md
- .github/commands/AGENTS.mdAGENTS.md
- .github/ISSUE_TEMPLATE/AGENTS.mdAGENTS.md
- .github/scripts/AGENTS.mdAGENTS.md
- .github/workflows/AGENTS.mdAGENTS.md
- .jules/AGENTS.mdAGENTS.md
- .pipelines/AGENTS.mdAGENTS.md
- projects/AGENTS.mdAGENTS.md
- scripts/AGENTS.mdAGENTS.md
- src/AGENTS.mdAGENTS.md
- tests/AGENTS.mdAGENTS.md
- .workflows/AGENTS.mdAGENTS.md
- CLAUDE.mdCLAUDE.md
- agent-interopSkill
- first-principlesSkill
- mcp-tool-useSkill
- red-teamSkill
- systems-thinkingSkill
- agent-interopSkill
- first-principlesSkill
- mcp-tool-useSkill
- qmdSkill
- red-teamSkill
- systems-thinkingSkill
- CodomyrmexSkill
- desloppifySkill
- Fractals orchestratorSkill
The file
Files
Codomyrmex Skill for PAI
Package version: v1.3.0 (tracks pyproject.toml) | Type: Infrastructure Skill | MCP: codomyrmex-mcp-server | Skills: 15 | Tools: 627 production @mcp_tool lines; 612 merged runtime tools in the complete locked dependency profile (inventory)
Description
Full-spectrum coding workspace skill providing 627 production @mcp_tool lines across 130 top-level modules for AI-assisted development, code analysis, testing, documentation generation, and workflow automation. In the complete locked dependency profile, the merged runtime manifest currently exposes 612 tools because decorator lines and registered runtime entries are distinct measurements.
Installation
# codomyrmex is not published on PyPI; install it from a checkout
uv syncQuick Start
# MCP server (for PAI agent consumption)
from codomyrmex.agents.pai.mcp_bridge import create_codomyrmex_mcp_server
server = create_codomyrmex_mcp_server()
server.run()
# Direct Python calls (no MCP overhead)
from codomyrmex.agents.pai import verify_capabilities, trust_all, trusted_call_tool
verify_capabilities() # Step 1: Audit & promote safe tools
trust_all() # Step 2: Grant full execution trust
result = trusted_call_tool("codomyrmex.write_file", path="x.py", content="...")Codex Access Probe
Codex sessions can inspect the repo-native agentic surface without mutating the workspace or launching agents:
uv run python scripts/agents/codex_access.py --json
uv run python scripts/agents/codex_access.py --check --json
uv run python scripts/agents/improve_src.py --dry-run --limit 2 --jsonThe same read-only payloads are exposed as MCP tools:
codomyrmex.codex_access_status- MCP, skills, trust, Hermes, and Codex readiness.codomyrmex.codex_dispatch_catalog- multiagent dispatch paths classified asread_only,dry_run, orside_effectful.
Skill Domains (15)
| Skill | Domain | Key Triggers |
codomyrmexVerify | Capability Audit | "verify codomyrmex", "audit tools" |
codomyrmexTrust | Trust Management | "trust codomyrmex", "enable destructive" |
codomyrmexAnalyze | Code Analysis | "analyze project", "code review" |
codomyrmexMemory | Memory | "add to memory", "remember this" |
codomyrmexSearch | Search | "search codebase", "grep pattern" |
codomyrmexDocs | Documentation | "get module docs", "module readme" |
codomyrmexStatus | Status Dashboard | "system status", "health check" |
CodomyrmexGit | Version Control | "git analysis", "commit timeline" |
CodomyrmexSecurity | Security & Crypto | "security scan", "crypto key" |
CodomyrmexAI | AI & Agents | "reasoning trace", "thinking agent" |
CodomyrmexCode | Code Execution | "execute code", "sandbox code" |
CodomyrmexData | Data & Visualization | "bar chart", "fuzzy search" |
CodomyrmexDeploy | Infrastructure | "docker build", "list instances" |
CodomyrmexTest | Testing | "run tests", "benchmark" |
Tools Summary (627 source decorators; 612 merged runtime tools)
Most tools are read-only; a small set is destructive (require /codomyrmexTrust). Run /codomyrmexVerify for the live safe/destructive split.
- Destructive:
write_file,run_command,run_tests,call_module_function
The source inventory contains 627 production decorator lines across 151 mcp_tools.py files and 130 top-level modules. Runtime registration is a separate measured surface: the merged manifest exposes 612 tools in the complete locked dependency profile, while the standalone full launcher and readonly HTTP profile expose narrower configured profiles.
Resources
codomyrmex://modules— Full module inventory (JSON)codomyrmex://status— System + PAI status (JSON)
Algorithm Phase Mapping
| Phase | Primary Tools |
| OBSERVE | list_modules, module_info, health_check, dependency_tree |
| THINK | analyze_python, search_codebase, think, query_knowledge_base |
| PLAN | read_file, json_query, analyze_workflow_dependencies |
| BUILD | write_file, generate_module_docs, code_execute |
| EXECUTE | run_command, run_tests, execute_agent, container_build |
| VERIFY | git_diff, checksum_file, solve_model, audit_code_security |
| LEARN | pai_awareness, memory_put, emit_event |
Trust Levels
| Level | Access | How |
UNTRUSTED | None | Default state |
VERIFIED | Read-only tools | /codomyrmexVerify |
TRUSTED | All registered dynamic tools (627 source @mcp_tool lines; 612 merged runtime tools in the complete locked dependency profile; see inventory) plus PAI static proxy tools | /codomyrmexTrust |
Repository
Source: src/codomyrmex/agents/pai/ — MCP bridge, trust gateway, PAI bridge
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