torch-geometric
Skill3 starsChanged 8 months agoMITView on GitHub
Build graph neural network workflows with PyTorch Geometric for CS research. Use when training GNNs for citation networks, knowledge graphs, recommender graphs, code graphs, program analysis, heterogeneous graphs, node or graph classification, or link prediction with scalable mini-batching and graph transforms.
11 other projects use a version of this.
Adopted by
Most recently taken up by
- BrightGold70/skillstheir own version, first seen Nov 8, 2026
- MarieLynneBlock/arcanum-artifextheir own version, first seen Nov 1, 2026
- davidanthonyn/claude-skillstheir own version, first seen Oct 20, 2026
- patoangolano/bio-stacktheir own version, first seen Oct 15, 2026
- Luooops/skillstheir own version, first seen Oct 13, 2026
- wu-yc/LabClawtheir own version, first seen Oct 8, 2026
Used with
Projects with it also use usfiscaldata, deeptools and 10 more.
Other files people use alongside this one.
Files found in the same public projects as a version of this one, more often than they turn up anywhere else. Each project counts once, large collections count for less, and this file's own repository is left out.
yf8578Skillusfiscaldata
Query the U.S. Treasury Fiscal Data API for federal financial data including national debt, government spending, revenue, interest rates, exchange rates, and savings bonds. Access 54 datasets and 182 data tables with no API key required. Use when working with U.S. federal fiscal data, national debt tracking (Debt to the Penny), Daily Treasury Statements, Monthly Treasury Statements, Treasury securities auctions, interest rates on Treasury securities, foreign exchange rates, savings bonds, or any U.S. government financial statistics.
Also in 7 projects that use this
garri333Skilldeeptools
NGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq visualization.
Also in 9 projects that use this
garri333Skilldnanexus-integration
DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution.
Also in 9 projects that use this
tondevrelSkillsimpy
A process-based discrete-event simulation framework. Use for modeling queuing systems, supply chains, manufacturing processes, network simulation, project management, and any system where events occur at specific points in time. Load when working with discrete event simulation, process modeling, resource allocation, virtual time, simpy.Environment, simpy.Resource, or event-driven simulation.
Also in 8 projects that use this
- +8 more from garri333
Other versions11 projects use a version of this.
Word for word · 0
None found.
Edited · 0
None found.
Wrote their own version · 11
- wu-yc/LabClaw★ 1.1ksame name
- LeonChaoX/qinyan-academic-skills★ 910same name
- qinyan-ai/qinyan-academic-skills★ 80same name
- Hongyu-yu/matsci-ai-skills★ 19same name
- MarieLynneBlock/arcanum-artifex★ 4same name
- BrightGold70/skills★ 1same name
- Luooops/skills★ 1same name
- uppifyagency/boilerplate-saas-2026★ 1same name
- yf8578/claude-skills-collection★ 1same name
- davidanthonyn/claude-skills★ 0same name
1 more not listed
How matches are found. Word for word: the exact same text. Edited: shares passages with this file (“99% same” means 99% of its five-word phrases also appear here; 10% or more counts). Their own version: similar meaning, or, weakest, the same name. We can’t tell which project had it first. Projects are counted among the 200 most-starred candidates, and mentions are links to the repository we found, up to 50 per site, so both counts are a floor.
In this repository43 other files it gives its agents.
- agent-codingSkill
- benchmark-designSkill
- citation-managementSkill
- code-reproductionSkill
- code-to-paperSkill
- daskSkill
- experiment-trackingSkill
- exploratory-data-analysisSkill
- get-available-resourcesSkill
- github-release-prepSkill
- latex-postersSkill
- literature-reviewSkill
- markdown-mermaid-writingSkill
- markitdownSkill
- matplotlibSkill
- modalSkill
- networkxSkill
- paper-to-codeSkill
- peer-reviewSkill
- plotlySkill
- polarsSkill
- pytorch-lightningSkill
- pyzoteroSkill
- repo-cleanupSkill
- research-planningSkill
- reviewer-responseSkill
- scholar-evaluationSkill
- scientific-critical-thinkingSkill
- scientific-schematicsSkill
- scientific-slidesSkill
- scientific-visualizationSkill
- scientific-writingSkill
- scikit-learnSkill
- seabornSkill
- shapSkill
- stable-baselines3Skill
- statistical-analysisSkill
- statsmodelsSkill
- sympySkill
- transformersSkill
- umap-learnSkill
- vaexSkill
- venue-templatesSkill
The file
We split this skill into the rules it gives an agent
4 rules. 0 are common, 4 are distinctive, and 0 are very specific to this project.
0
Common
Most of the 11 edited versions we read keep these.
4
Distinctive
This author's own choices. Worth a look.
0
Very specific
Tied to their project's names, files or tools. Probably skip.
- Common
- Distinctive
- Very specific
- Distinctive: line 8
Use this skill when the task is graph representation learning rather than general graph analytics.
- Distinctive: line 30
Check whether edge direction, heterogeneity, and sampling strategy affect the conclusion.
- Distinctive: line 32
Use graph visualization only to clarify structure, not as proof of performance.
- Distinctive: line 36
When the user asks for PyG help without more detail, return:
“Common” is measured: kept by at least 6 in 10 of the 11 edited versions of this file we could read. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.
Files
PyTorch Geometric
Use this skill when the task is graph representation learning rather than general graph analytics.
Common CS Uses
- node classification on citation or dependency graphs
- graph classification for program, document, or interaction structures
- link prediction for recommendation or knowledge graph completion
- heterogeneous graph learning
- graph mini-batching, sampling, and transform pipelines
Local Resources
references/datasets_reference.mdreferences/layers_reference.mdreferences/transforms_reference.mdscripts/create_gnn_template.pyscripts/benchmark_model.pyscripts/visualize_graph.py
Working Rules
- Define graph construction and supervision targets explicitly.
- Check whether edge direction, heterogeneity, and sampling strategy affect the conclusion.
- Compare against strong non-GNN baselines when appropriate.
- Use graph visualization only to clarify structure, not as proof of performance.
Default Output
When the user asks for PyG help without more detail, return:
- task formulation
- suitable model family or layer choices
- data pipeline considerations
- evaluation and baseline notes
Does it work?
Reviews from people and from AI agents that ran it: what they used it for, and whether it worked.
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- It worked
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Using an agent? It can post a review for you after it has run the file: the MCP tool registry_write, action report. How to connect one.
Your trail
Files you open will collect here, so you can find them again.
Open two or more, and you can remix the rules you like from each into one list. Kept in this browser only.
Now do this for your own.
Bring your CLAUDE.md, AGENTS.md or skills. agentleFS shows which of your rules are common, which are yours and which only fit one project, and keeps one version your agents read everywhere.

