scientific-visualization
Skill3 starsChanged 8 months agoMITView on GitHub
Orchestrate publication-ready figures for CS papers, posters, slides, and benchmark reports. Use when assembling multi-panel result figures, harmonizing styles across plots, preparing export settings, or turning experiment outputs into clear visual evidence for submissions and technical communication.
21 other projects use a version of this.
Adopted by
Most recently taken up by
- HughYau/AcademicForgetheir own version, first seen Nov 8, 2026
- BrightGold70/skillstheir own version, first seen Nov 8, 2026
- esmailhussien/terraprooftheir own version, first seen Nov 1, 2026
- Big-LAORE/Biblioth-que-de-skillstheir own version, first seen Nov 1, 2026
- davidanthonyn/claude-skillstheir own version, first seen Oct 20, 2026
- erafat/skillstheir own version, first seen Oct 15, 2026
Used with
Projects with it also use usfiscaldata, etetoolkit and 9 more.
Other files people use alongside this one.
Files found in the same public projects as a version of this one, more often than they turn up anywhere else. Each project counts once, large collections count for less, and this file's own repository is left out.
yf8578Skillusfiscaldata
Query the U.S. Treasury Fiscal Data API for federal financial data including national debt, government spending, revenue, interest rates, exchange rates, and savings bonds. Access 54 datasets and 182 data tables with no API key required. Use when working with U.S. federal fiscal data, national debt tracking (Debt to the Penny), Daily Treasury Statements, Monthly Treasury Statements, Treasury securities auctions, interest rates on Treasury securities, foreign exchange rates, savings bonds, or any U.S. government financial statistics.
Also in 6 projects that use this
garri333Skilletetoolkit
Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for phylogenomics.
Also in 10 projects that use this
garri333Skilldeeptools
NGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq visualization.
Also in 9 projects that use this
tondevrelSkillscikit-bio
Library for bioinformatics and community ecology statistics. Provides data structures and algorithms for sequences, alignments, phylogenetics, and diversity analysis. Essential for microbiome research and ecological data science. Use for alpha/beta diversity metrics, ordination (PCoA), phylogenetic trees, sequence manipulation (DNA/RNA/Protein), distance matrices, PERMANOVA, and community ecology analysis.
Also in 9 projects that use this
- +7 more from garri333
Other versions21 projects use a version of this.
Word for word · 0
None found.
Edited · 0
None found.
Wrote their own version · 21
- aiming-lab/AutoResearchClaw★ 15ksame name
- HughYau/AcademicForge★ 2.6ksame name
- wu-yc/LabClaw★ 1.1ksame name
- LeonChaoX/qinyan-academic-skills★ 910same name
- jaechang-hits/SciAgent-Skills★ 386same name
- qinyan-ai/qinyan-academic-skills★ 80same name
- erafat/skills★ 17same name
- SFETNI/Deep-Matter-Chem-Skills★ 10same name
- hxhx-win/zhuanli-flow★ 4same name
- rm2thaddeus/Aitor_Skills★ 4same name
11 more not listed
How matches are found. Word for word: the exact same text. Edited: shares passages with this file (“99% same” means 99% of its five-word phrases also appear here; 10% or more counts). Their own version: similar meaning, or, weakest, the same name. We can’t tell which project had it first. Projects are counted among the 200 most-starred candidates, and mentions are links to the repository we found, up to 50 per site, so both counts are a floor.
In this repository43 other files it gives its agents.
- agent-codingSkill
- benchmark-designSkill
- citation-managementSkill
- code-reproductionSkill
- code-to-paperSkill
- daskSkill
- experiment-trackingSkill
- exploratory-data-analysisSkill
- get-available-resourcesSkill
- github-release-prepSkill
- latex-postersSkill
- literature-reviewSkill
- markdown-mermaid-writingSkill
- markitdownSkill
- matplotlibSkill
- modalSkill
- networkxSkill
- paper-to-codeSkill
- peer-reviewSkill
- plotlySkill
- polarsSkill
- pytorch-lightningSkill
- pyzoteroSkill
- repo-cleanupSkill
- research-planningSkill
- reviewer-responseSkill
- scholar-evaluationSkill
- scientific-critical-thinkingSkill
- scientific-schematicsSkill
- scientific-slidesSkill
- scientific-writingSkill
- scikit-learnSkill
- seabornSkill
- shapSkill
- stable-baselines3Skill
- statistical-analysisSkill
- statsmodelsSkill
- sympySkill
- torch-geometricSkill
- transformersSkill
- umap-learnSkill
- vaexSkill
- venue-templatesSkill
The file
We split this skill into the rules it gives an agent
5 rules. 0 are common, 5 are distinctive, and 0 are very specific to this project.
0
Common
Most of the 21 edited versions we read keep these.
5
Distinctive
This author's own choices. Worth a look.
0
Very specific
Tied to their project's names, files or tools. Probably skip.
- Common
- Distinctive
- Very specific
- Distinctive: line 8
Use this skill when figure quality, consistency, and evidence communication matter more than raw plotting mechanics.
- Distinctive: line 48
Use consistent semantics across panels.
- Distinctive: line 50
Do not overload a paper figure with dashboard-level detail.
- Distinctive: line 51
If the figure is exploratory rather than final, use seaborn or plotly directly instead.
- Distinctive: line 55
When the user asks for figure help without more detail, return:
“Common” is measured: kept by at least 6 in 10 of the 21 edited versions of this file we could read. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.
Files
Scientific Visualization
Use this skill when figure quality, consistency, and evidence communication matter more than raw plotting mechanics.
Typical CS Outputs
- benchmark comparison figures
- ablation summaries
- latency / memory / accuracy tradeoff panels
- error analysis views
- embedding or representation comparison panels
- reproducibility or scaling plots
- poster or slide figure sets with consistent styling
Workflow
- Identify the claim each figure must support.
- Choose the smallest set of plots that makes the comparison interpretable.
- Standardize colors, labels, scales, and panel conventions.
- Export in formats appropriate to the destination: paper, slide, poster, or README.
Local Resources
Assets:
assets/publication.mplstyleassets/presentation.mplstyleassets/color_palettes.pyassets/nature.mplstyleas an inherited legacy style, not the default
References:
references/publication_guidelines.mdreferences/color_palettes.mdreferences/matplotlib_examples.mdreferences/journal_requirements.mdonly when a venue genuinely requires it
Scripts:
scripts/figure_export.pyscripts/style_presets.py
Working Rules
- Optimize first for truthful comparison, then for polish.
- Use consistent semantics across panels.
- Label uncertainty clearly when seeds, folds, or repeated trials matter.
- Do not overload a paper figure with dashboard-level detail.
- If the figure is exploratory rather than final, use seaborn or plotly directly instead.
Default Output
When the user asks for figure help without more detail, return:
- figure set recommendation
- panel structure and style notes
- export guidance for the target medium
- risks that could make the visual misleading
Does it work?
Reviews from people and from AI agents that ran it: what they used it for, and whether it worked.
No reviews yet
People and AI agents can review whether this works in practice. Say what you used it for, and whether it worked.
- It worked
- Partly
- It didn't
Using an agent? It can post a review for you after it has run the file: the MCP tool registry_write, action report. How to connect one.
Your trail
Files you open will collect here, so you can find them again.
Open two or more, and you can remix the rules you like from each into one list. Kept in this browser only.
Now do this for your own.
Bring your CLAUDE.md, AGENTS.md or skills. agentleFS shows which of your rules are common, which are yours and which only fit one project, and keeps one version your agents read everywhere.

