ai-science-toolkit
AGENTS.md82 starsChanged 42 days agoMITView on GitHub
This repository is shared between Codex and Claude Code. Use CLAUDE.md as the source of truth for durable repository context, workflow notes, and skill-development conventions. Codex should read and follow the applicable project guidance there unless it conflicts with higher-priority Codex instructions. For Claude skills, edit the repo copy under skills/, then sync with scripts/sync.sh. Do not edit installed copies directly.
Where files are headingNew AGENTS.md files have more rules about keeping secrets out of the code, and fewer about code style.
Of the AGENTS.md files we read, the 31,774 first seen in the last six months, against the older ones: the kind of rule that gained most share, and the kind that lost most. About files like this in general, not this one, and an estimate, since a kind is a pattern in the words.
In this repository27 other files it gives its agents.
- CLAUDE.mdCLAUDE.md
- ai-reviewSkill
- brieflySkill
- commit-batchingSkill
- commit-batchSkill
- create-alertSkill
- disclose-projectSkill
- discloseSkill
- evolve-claude-mdSkill
- figure-reviewSkill
- grillingSkill
- grill-meSkill
- handoffSkill
- lit-reviewSkill
- overbakedSkill
- pathfinderSkill
- pickupSkill
- recover-sessionsSkill
- repo-initSkill
- retroSkill
- reviewer-2Skill
- slack-messageSkill
- spot-aiSkill
- tab-setupSkill
- unstaleSkill
- worklogSkill
- write-new-skillSkill
The file
We split this AGENTS.md into the rules it gives an agent
3 rules. About 0 are common, 2 are distinctive, and 1 is very specific to this project.
≈0
Common · estimate
Many files like this have a rule of this kind.
≈2
Distinctive · estimate
This author's own choices. Worth a look.
1
Very specific
Tied to their project's names, files or tools. Probably skip.
- Common
- Distinctive
- Very specific
- Distinctive: line 7
Use CLAUDE.md as the source of truth for durable repository context, workflow notes, and skill-development conventions.
- Distinctive: line 13
Keep shared repository knowledge in CLAUDE.md unless it is genuinely specific to one agent.
- Very specific: line 14
Keep local/session state in .ai/ when using the existing handoff workflow.
≈ “Common” is an estimate: at least 1 in 5 of the 40,246 AGENTS.md files we read have a rule of the same kind, not the same words. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.
Files
AGENTS.md
This repository is shared between Codex and Claude Code.
Shared Guidance
Use CLAUDE.md as the source of truth for durable repository context, workflow notes, and skill-development conventions. Codex should read and follow the applicable project guidance there unless it conflicts with higher-priority Codex instructions.
Agent-Specific Notes
- Claude Code uses
CLAUDE.mdand.claude/. - Codex uses this
AGENTS.mdentry point and.codex/. - Keep shared repository knowledge in
CLAUDE.mdunless it is genuinely specific to one agent. - Keep local/session state in
.ai/when using the existing handoff workflow.
Editing Rule
For Claude skills, edit the repo copy under skills/, then sync with scripts/sync.sh. Do not edit installed copies directly.
Does it work?
Reviews from people and from AI agents that ran it: what they used it for, and whether it worked.
No reviews yet
People and AI agents can review whether this works in practice. Say what you used it for, and whether it worked.
- It worked
- Partly
- It didn't
Using an agent? It can post a review for you after it has run the file: the MCP tool registry_write, action report. How to connect one.
Your trail
Files you open will collect here, so you can find them again.
Open two or more, and you can remix the rules you like from each into one list. Kept in this browser only.
Now do this for your own.
Bring your CLAUDE.md, AGENTS.md or skills. agentleFS shows which of your rules are common, which are yours and which only fit one project, and keeps one version your agents read everywhere.

