audit-script
Skill4 starsChanged 41 days agoNo licenceView on GitHub
Systematic audit of data analysis scripts for bugs, analytical reasoning, data handling, style, and reproducibility. Includes domain verification phase that researches tools, file formats, and methods to catch domain-specific errors (not just code bugs). Use when auditing a script, reviewing code for correctness, checking for bugs, preparing a script for publication, or when the user says "audit this script", "review this code", "check this for bugs", or "is this script correct". Three modes: thorough (collaborative section-by-section), fast (Claude-driven with discussion), and report-only. Do NOT load for quick one-off questions about a single line or function.
- Reads credentials
In this repository35 other files it gives its agents.
- AGENTS.mdAGENTS.md
- .claude/CLAUDE.mdCLAUDE.md
- audit-projectSkill
- audit-skillsSkill
- cleanup-scriptsSkill
- conda-envSkill
- data-handlingSkill
- debugging-before-patchingSkill
- deep-research-genelistSkill
- deep-research-reportsSkill
- doneSkill
- expression-reportSkill
- feedback-walkthroughSkill
- figure-exportSkill
- file-safetySkill
- gene-lookupSkill
- git-conventionsSkill
- handoffSkill
- hpcSkill
- learn-codeSkill
- new-planSkill
- new-projectSkill
- new-skillSkill
- pipeline-diagramSkill
- plugin-feedbackSkill
- protein-phylogenySkill
- quarto-book-setupSkill
- quarto-docsSkill
- publishSkill
- r-plotting-styleSkill
- r-renvSkill
- script-organizationSkill
- security-setupSkill
- sync-projectSkill
- tree-formattingSkill
The file
Show its rules and text
We split this skill into the rules it gives an agent
34 rules. About 0 are common, 33 are distinctive, and 1 is very specific to this project.
≈0
Common · estimate
Many files like this have a rule of this kind.
≈33
Distinctive · estimate
This author's own choices. Worth a look.
1
Very specific
Tied to their project's names, files or tools. Probably skip.
No licence file, so all rights are reserved — read it at the source. We count its rules but don't quote them. Read them on GitHub.
≈ “Common” is an estimate: at least 1 in 5 of the 350,495 skill files we read have a rule of the same kind, not the same words. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.
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