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LuooopsLuooops/skills/benchling-integration/SKILL.md

benchling-integration

Skill1 starsChanged 51 days agoNo licenceView on GitHub

Benchling Python SDK and REST API integration for registry entities, inventory, ELN entries, workflows, Benchling Apps, and Data Warehouse queries. Use when automating lab data with benchling-sdk or the v2 API.

  • Reads credentials
  • Installs packages

11 other projects use a version of this, 10 of them edited.

Adopted by

Most recently taken up by

Used with

Projects with it also use uspto-database, string-database and 3 more.

Other files people use alongside this one.

Files found in the same public projects as a version of this one, more often than they turn up anywhere else. Each project counts once, large collections count for less, and this file's own repository is left out.
  • yf8578Skill

    uspto-database

    Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions, TSDR, for IP analysis and prior art searches.

    Also in 7 projects that use this

  • Google DeepMindSkill

    string-database

    Query the STRING database for protein-protein interactions (PPIs), functional enrichment, and homology. Use when the user asks about interactions between specific proteins, interaction evidence, confidence scores, protein interaction partners, or pathway enrichments.

    Also in 7 projects that use this

  • refly-aiSkill

    alpha-vantage

    Get financial data from Alpha Vantage. Use when you need to: (1) retrieve stock quotes and prices, (2) get forex or crypto rates, or (3) access market analytics data.

    Also in 4 projects that use this

  • Google DeepMindSkill

    interpro-database

    Identify domains, families, and sites in proteins; find all proteins in a family or sharing a domain; explore species distribution for a domain; annotate genomes with protein families and GO terms. InterPro combines 14 databases (e.g., Pfam, CDD) into one searchable resource. InterPro-N significantly expands annotation and sequence coverage with deep learning. Includes domain architecture (IDA) search.

    Also in 5 projects that use this

  • +1 more from google-deepmind

The file

We split this skill into the rules it gives an agent

5 rules. 2 are common, 0 are distinctive, and 3 are very specific to this project.

  • 2

    Common

    Most of the 11 edited versions we read keep these.

  • 0

    Distinctive

    This author's own choices. Worth a look.

  • 3

    Very specific

    Tied to their project's names, files or tools. Probably skip.

No licence file, so all rights are reserved — read it at the source. We count its rules but don't quote them. Read them on GitHub.

“Common” is measured: kept by at least 6 in 10 of the 11 edited versions of this file we could read. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.

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What did you use it for? e.g. Reviewing pull requests in a Rails app

Using an agent? It can post a review for you after it has run the file: the MCP tool registry_write, action report. How to connect one.

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