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I-OnlabsI-Onlabs/claude-code-skills/root-cause-tracing/SKILL.md

root-cause-tracing

Skill4 starsChanged 26 days agoMITView on GitHub

Use when errors occur deep in execution and you need to trace back to find the original trigger - systematically traces bugs backward through call stack, adding instrumentation when needed, to identify source of invalid data or incorrect behavior

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15 other projects use a version of this, 7 of them edited.

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Projects with it also use condition-based-waiting.

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  • kntismSkill

    condition-based-waiting

    Use when tests have race conditions, timing dependencies, or inconsistent pass/fail behavior - replaces arbitrary timeouts with condition polling to wait for actual state changes, eliminating flaky tests from timing guesses

    Also in 3 projects that use this

The file

We split this skill into the rules it gives an agent

7 rules. 2 are common, 1 is distinctive, and 4 are very specific to this project.

  • 2

    Common

    Most of the 11 edited versions we read keep these.

  • 1

    Distinctive

    This author's own choices. Worth a look.

  • 4

    Very specific

    Tied to their project's names, files or tools. Probably skip.

  • Common
  • Distinctive
  • Very specific
  1. Common:

    When you can't trace manually, add instrumentation:

    line 73
  2. Very specific:

    Critical: Use console.error() in tests (not logger - may not show)

    line 90
  3. Distinctive:

    Look for test file names

    line 98
  4. Common:

    If something appears during tests but you don't know which test:

    line 104
  5. Very specific:

    Use the bisection script: @find-polluter.sh

    line 106
  6. Very specific:

    Test accessed context.tempDir before beforeEach

    line 122
  7. Very specific:

    In tests: Use console.error() not logger - logger may be suppressed

    line 163

“Common” is measured: kept by at least 6 in 10 of the 11 edited versions of this file we could read. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.

Keep what fits and drop the rest. Your version, ready for your agents.
Files
SKILL.md

Root Cause Tracing

Overview

Bugs often manifest deep in the call stack (git init in wrong directory, file created in wrong location, database opened with wrong path). Your instinct is to fix where the error appears, but that's treating a symptom.

Core principle: Trace backward through the call chain until you find the original trigger, then fix at the source.

When to Use

digraph when_to_use {
    "Bug appears deep in stack?" [shape=diamond];
    "Can trace backwards?" [shape=diamond];
    "Fix at symptom point" [shape=box];
    "Trace to original trigger" [shape=box];
    "BETTER: Also add defense-in-depth" [shape=box];

    "Bug appears deep in stack?" -> "Can trace backwards?" [label="yes"];
    "Can trace backwards?" -> "Trace to original trigger" [label="yes"];
    "Can trace backwards?" -> "Fix at symptom point" [label="no - dead end"];
    "Trace to original trigger" -> "BETTER: Also add defense-in-depth";
}

Use when:

  • Error happens deep in execution (not at entry point)
  • Stack trace shows long call chain
  • Unclear where invalid data originated
  • Need to find which test/code triggers the problem

The Tracing Process

1. Observe the Symptom

Error: git init failed in /Users/jesse/project/packages/core

2. Find Immediate Cause

What code directly causes this?

await execFileAsync('git', ['init'], { cwd: projectDir });

3. Ask: What Called This?

WorktreeManager.createSessionWorktree(projectDir, sessionId)
  → called by Session.initializeWorkspace()
  → called by Session.create()
  → called by test at Project.create()

4. Keep Tracing Up

What value was passed?

  • projectDir = '' (empty string!)
  • Empty string as cwd resolves to process.cwd()
  • That's the source code directory!

5. Find Original Trigger

Where did empty string come from?

const context = setupCoreTest(); // Returns { tempDir: '' }
Project.create('name', context.tempDir); // Accessed before beforeEach!

Adding Stack Traces

When you can't trace manually, add instrumentation:

// Before the problematic operation
async function gitInit(directory: string) {
  const stack = new Error().stack;
  console.error('DEBUG git init:', {
    directory,
    cwd: process.cwd(),
    nodeEnv: process.env.NODE_ENV,
    stack,
  });

  await execFileAsync('git', ['init'], { cwd: directory });
}

Critical: Use console.error() in tests (not logger - may not show)

Run and capture:

npm test 2>&1 | grep 'DEBUG git init'

Analyze stack traces:

  • Look for test file names
  • Find the line number triggering the call
  • Identify the pattern (same test? same parameter?)

Finding Which Test Causes Pollution

If something appears during tests but you don't know which test:

Use the bisection script: @find-polluter.sh

./find-polluter.sh '.git' 'src/**/*.test.ts'

Runs tests one-by-one, stops at first polluter. See script for usage.

Real Example: Empty projectDir

Symptom: .git created in packages/core/ (source code)

Trace chain:

  1. git init runs in process.cwd() ← empty cwd parameter
  2. WorktreeManager called with empty projectDir
  3. Session.create() passed empty string
  4. Test accessed context.tempDir before beforeEach
  5. setupCoreTest() returns { tempDir: '' } initially

Root cause: Top-level variable initialization accessing empty value

Fix: Made tempDir a getter that throws if accessed before beforeEach

Also added defense-in-depth:

  • Layer 1: Project.create() validates directory
  • Layer 2: WorkspaceManager validates not empty
  • Layer 3: NODE_ENV guard refuses git init outside tmpdir
  • Layer 4: Stack trace logging before git init

Key Principle

digraph principle {
    "Found immediate cause" [shape=ellipse];
    "Can trace one level up?" [shape=diamond];
    "Trace backwards" [shape=box];
    "Is this the source?" [shape=diamond];
    "Fix at source" [shape=box];
    "Add validation at each layer" [shape=box];
    "Bug impossible" [shape=doublecircle];
    "NEVER fix just the symptom" [shape=octagon, style=filled, fillcolor=red, fontcolor=white];

    "Found immediate cause" -> "Can trace one level up?";
    "Can trace one level up?" -> "Trace backwards" [label="yes"];
    "Can trace one level up?" -> "NEVER fix just the symptom" [label="no"];
    "Trace backwards" -> "Is this the source?";
    "Is this the source?" -> "Trace backwards" [label="no - keeps going"];
    "Is this the source?" -> "Fix at source" [label="yes"];
    "Fix at source" -> "Add validation at each layer";
    "Add validation at each layer" -> "Bug impossible";
}

NEVER fix just where the error appears. Trace back to find the original trigger.

Stack Trace Tips

In tests: Use console.error() not logger - logger may be suppressed Before operation: Log before the dangerous operation, not after it fails Include context: Directory, cwd, environment variables, timestamps Capture stack: new Error().stack shows complete call chain

Real-World Impact

From debugging session (2025-10-03):

  • Found root cause through 5-level trace
  • Fixed at source (getter validation)
  • Added 4 layers of defense
  • 1847 tests passed, zero pollution

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