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aiagentwithdhruvaiagentwithdhruv/skills/literature-research/SKILL.md

literature-research

Skill16 starsChanged 9 months agoMITView on GitHub

Search academic literature and perform deep research reviews. Use when user asks to search PubMed, find academic papers, or do literature reviews.

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7 other projects use a version of this, 3 of them edited.

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The file

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1 rule. 0 are common, 1 is distinctive, and 0 are very specific to this project.

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    Common

    Most of the 7 edited versions we read keep these.

  • 1

    Distinctive

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  • 0

    Very specific

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  • Common
  • Distinctive
  • Very specific
  1. Distinctive:

    Search academic databases and perform comprehensive literature reviews.

    line 9

“Common” is measured: kept by at least 6 in 10 of the 7 edited versions of this file we could read. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.

Keep what fits and drop the rest. Your version, ready for your agents.
Files
SKILL.md

Literature Research

Goal

Search academic databases and perform comprehensive literature reviews.

Scripts

  • ./scripts/pubmed_literature_search.py - Search PubMed
  • ./scripts/literature_deep_review.py - Deep review with Claude

Usage

Search PubMed

python3 ./scripts/pubmed_literature_search.py \
  --query "machine learning cancer diagnosis" \
  --limit 50 \
  --output .tmp/papers.json

Deep Review

python3 ./scripts/literature_deep_review.py \
  --input .tmp/papers.json \
  --output .tmp/review.md

Output

  • JSON file with paper metadata
  • Markdown review with key findings, themes, gaps

Schema

Inputs

NameTypeRequiredDescription
querystringYesResearch query (e.g., 'machine learning cancer diagnosis')
limitintegerNoMax papers to fetch (default: 50)

Outputs

NameTypeDescription
papers_filefile_pathJSON file with paper metadata
review_filefile_pathMarkdown review with key findings, themes, gaps

Credentials

NameSource
ANTHROPIC_API_KEY.env

Cost

Free (PubMed API) + Claude for review

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