AutoSci
CLAUDE.md1.7k starsChanged 34 days agoMITView on GitHub
Edit i18n/en/CLAUDE.md, not the active copy at root. Run ./setup.sh --lang en to sync. Full tree: docs/runtime-directory-structure.en.md. Wikilinks: [[slug]]. Slugs are lowercase, hyphen-separated, no spaces. Prefer in order: .venv/bin/python (.venv/Scripts/python.exe on Windows) → active conda env → python3 (python on Windows). Tools auto-load API keys from ~/.env and project-root .env via tools/_env.py.
- Reads credentials
We split this CLAUDE.md into the rules it gives an agent
1 rule. About 0 are common, 0 are distinctive, and 1 is very specific to this project.
≈0
Common · estimate
Many files like this have a rule of this kind.
≈0
Distinctive · estimate
This author's own choices. Worth a look.
1
Very specific
Tied to their project's names, files or tools. Probably skip.
- Common
- Distinctive
- Very specific
- Very specific: line 40
Prefer in order: .venv/bin/python (.venv/Scripts/python.exe on Windows) → active conda env → python3 (python on Windows).
≈ “Common” is an estimate: at least 1 in 5 of the 25,680 CLAUDE.md files we read have a rule of the same kind, not the same words. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.
Files
ΩmegaWiki — Runtime Contract
Edit i18n/en/CLAUDE.md, not the active copy at root. Run ./setup.sh --lang en to sync.
Repository Layout
wiki/— product surface.index.mdis the catalog;log.mdis append-only; subdirs per entity kind;wiki/graph/is auto-generated.runtime/— contract source (schema + policy + templates). Readruntime/CLAUDE.mdbefore changing any rule.raw/— user-owned{papers,notes,web}/(read-only) + skill-writablediscovered/,tmp/.tools/— Python helpers (research_wiki.pyis the wiki engine;lint.pyis the validator).
Full tree: docs/runtime-directory-structure.en.md.
Link Syntax
Wikilinks: [[slug]]. Slugs are lowercase, hyphen-separated, no spaces.
Hard Rules
raw/{papers,notes,web}are user-owned, read-only. Skills append only toraw/discovered/orraw/tmp/.wiki/graph/is derived. Modify only viatools/research_wiki.py(add-edge,add-citation,rebuild-*).wiki/log.mdis append-only. Never rewrite in place.- Forward link → write reverse simultaneously. Rules in
runtime/schema/xref.yaml. - User-facing skill flags (those listed in a skill's
argument-hint) are user-owned. Do not invent, flip, or drop them based on repo state. If the user omitted one, use a default only when the skill documents omission behavior; otherwise ask.
Where to look
| Need | Source |
| Page frontmatter fields, enums, defaults, lifecycle | runtime/schema/entities.yaml |
| Page body section structure | runtime/templates/{kind}.md.tmpl |
| Edge types, attributes, direction, confidence | runtime/schema/edges.yaml |
| Forward → reverse link rules | runtime/schema/xref.yaml |
| Slug rule, ownership, edge storage location | runtime/schema/conventions.yaml |
| Field/edge write permissions per skill | runtime/policy/writers.yaml |
| Changing the contract / regen | runtime/CLAUDE.md |
Python Environment
Prefer in order: .venv/bin/python (.venv/Scripts/python.exe on Windows) → active conda env → python3 (python on Windows). Tools auto-load API keys from ~/.env and project-root .env via tools/_env.py.
Trending
More talk lately.thin dataabout the whole repository
Who's talking about PKU-DAIR/AutoSci
The biggest 1 of 1 mention linking to the repository that our crawl found. Each line is their own headline.
Other versions3 projects use a version of this.
Word for word · 3
- DAIR-AutoResearch/AutoSci★ 1.7k100% same
- skyllwt/AutoSci★ 1.7k100% same
- skyllwt/OmegaWiki★ 1.7k100% same
Edited · 0
None found.
Wrote their own version · 0
None found.
How matches are found. Word for word: the exact same text. Edited: shares passages with this file (“99% same” means 99% of its five-word phrases also appear here; 10% or more counts). Their own version: similar meaning, or, weakest, the same name. We can’t tell which project had it first. Projects are counted among the 200 most-starred candidates, and mentions are links to the repository we found, up to 50 per site, so both counts are a floor.
In this repository30 other files it gives its agents.
- runtime/CLAUDE.mdCLAUDE.md
- askSkill
- checkSkill
- daily-arxivSkill
- discoverSkill
- editSkill
- exp-designSkill
- exp-evalSkill
- exp-pilot-evalSkill
- exp-pilot-runSkill
- exp-runSkill
- exp-statusSkill
- hiera-experimentSkill
- ideateSkill
- ingestSkill
- initSkill
- noveltySkill
- paper-compileSkill
- paper-draftSkill
- paper-planSkill
- posterSkill
- prefillSkill
- rebuttalSkill
- refineSkill
- researchSkill
- resetSkill
- reviewSkill
- setupSkill
- surveySkill
- visualizeSkill
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Your trail
Files you open will collect here, so you can find them again.
Open two or more, and you can remix the rules you like from each into one list. Kept in this browser only.
Now do this for your own.
Bring your CLAUDE.md, AGENTS.md or skills. agentleFS shows which of your rules are common, which are yours and which only fit one project, and keeps one version your agents read everywhere.