agentleFS
DeepXivDeepXiv/deepxiv_sdk/skills/deepxiv-fa-drugs/SKILL.md

deepxiv-fa-drugs

Skill843 starsChanged 8 months agoMITView on GitHub

Search ~257k US drug labels (openFDA SPL): indications, contraindications, interactions, boxed warnings, pharmacologic class. Use when a task needs what a US drug label says.

  • Installs packages

The file

We split this skill into the rules it gives an agent

2 rules. About 0 are common, 1 is distinctive, and 1 is very specific to this project.

  • ≈0

    Common · estimate

    Many files like this have a rule of this kind.

  • ≈1

    Distinctive · estimate

    This author's own choices. Worth a look.

  • 1

    Very specific

    Tied to their project's names, files or tools. Probably skip.

  • Common
  • Distinctive
  • Very specific
  1. Very specific:

    Always pass -d drugs: automatic domain picking is still early.

    line 77
  2. Distinctive:

    Only the latest version per set_id is kept.

    line 82

≈ “Common” is an estimate: at least 1 in 5 of the 350,495 skill files we read have a rule of the same kind, not the same words. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.

Keep what fits and drop the rest. Your version, ready for your agents.
Files
SKILL.md

DeepXiv · Drugs (drugs)

~257k US drug labels (openFDA SPL, latest version per set_id; Synced daily; exact counts are in corpus (live)). Indications, contraindications, interacting drugs, boxed-warning gist and one-line summaries are model-extracted; route / product type / pharmacologic class come from the openfda mapping block.

Corpus: 256,993 documents, updated 2026-10.

Setup

pip install -U deepxiv-sdk      # deepxiv registers a token on first use

With a registered key (https://data.rag.ac.cn/register), search and read are fair use: 60/min, 5 at once, 5,000/day; on the auto-registered token they spend the deepxiv daily limit at the credits listed below. ask draws on the daily ask allowance (resets 00:00 UTC; a site-wide daily total can run out early at peak times), or 3 lifetime trial asks on the auto-registered token. On 429, back off for Retry-After seconds. Data goes to stdout; cost, quota and sources go to stderr. Exit 0 ok, 1 API error, 2 usage error. The general CLI guide is the deepxiv-cli skill.

Start here

deepxiv fa search drugs "GLP-1 weight loss" -F has_boxed_warning=true -k 5
deepxiv fa search drugs "anticoagulant" -F route=ORAL -F is_rx=true -k 5
deepxiv fa read drugs f5e548d0-cc79-4c34-a3f5-e20a5b8b6564 -l brief
deepxiv fa ask "Which drugs interact with warfarin according to their labels?" -d drugs

Free samples: ids f5e548d0-cc79-4c34-a3f5-e20a5b8b6564; queries semaglutide weight loss.

Search

deepxiv fa search drugs "query" [-F FILTER]... [-k N] [--offset N] [--mode M] [--head] [--json]

Modes: hybrid, dense, bm25. Up to 100 hits. Cost 2 (with --head: 3). An empty query is rejected; use "*" to list by filters only. Filters combine with AND; an undeclared field exits 2.

filtertype-F syntaxmeaning
routekeywordk=v, k=a,bRoute of administration Values: ORAL, TOPICAL, INTRAVENOUS, INTRAMUSCULAR, SUBCUTANEOUS, OPHTHALMIC, NASAL, RESPIRATORY (INHALATION) ….
product_typekeywordk=v, k=a,bProduct type; UNMAPPED = the SPL has no openfda mapping block Values: HUMAN PRESCRIPTION DRUG, HUMAN OTC DRUG, CELLULAR THERAPY, UNMAPPED.
is_rxboolk=vPrescription-only
has_boxed_warningboolk=vHas a boxed warning
pharm_class_epckeywordk=v, k=a,bPharmacologic class (EPC)
effective_yearintegerk=v, k>=n, k=n..mLabel version year, range

Advanced filters (see deepxiv fa spec drugs): generic_name, substance_names, pharm_class_moa, manufacturer, rxcui, unii, product_ndc, application_number.

Read

deepxiv fa read drugs ID [ID...] [-l brief|detail|full] [-e EXTRA] [-p k=v]... [-f json|md|html]
levelcreditsreturns
brief1Card: the fields needed to triage, same as in search hits
detail (default)2Every structured field (rule-derived plus model-generated; model fields are listed in _enrich.fields)
full5Full text (not available yet: the label sections live on NAS (openfda/label); the index carries only section names and token counts)

At -l full, -p section=NAME reads one section and -p characters=N the first N characters.

Facets

deepxiv fa facets drugs FIELD lists the legal values and counts, free. Use it instead of guessing a spelling. Fields: route, product_type, pharm_class_epc.

Ask

deepxiv fa ask "question" -d drugs [-e low|medium|high] [-p k=v]... [--no-stream] [--json]

Agentic Q&A over this domain: the model turns the question into filters plus keywords from the domain's own self-description, reads the hits and answers with [drugs:<set_id> <title>] citations; /stream is NDJSON with real token deltas

Always pass -d drugs: automatic domain picking is still early.

What this corpus will and will not tell you

  • 67% (171,903) are product_type=UNMAPPED: those SPLs have no openfda mapping block, so generic name / route / pharmacologic class may be empty — use spl_name for the product name.
  • Only the latest version per set_id is kept; no label history.
  • Indications and contraindications are extracted highlights; go back to the label for prescribing decisions.
  • Not medical advice.
  • The index holds no full text: level=full is not available yet (the label sections live on NAS (openfda/label); the index carries only section names and token counts).

Citing

Cite records as [openFDA SPL f5e548d0…]. Say plainly when the corpus has nothing.


Generated by scripts/gen_fa_skills.py from deepxiv fa spec drugs --json on 2026-10-19. Field names and prices can change; deepxiv fa spec drugs is the live source.

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