systematic-research-skills
CLAUDE.md14 starsChanged 4 months agoMITView on GitHub
Research methodology skills for coding agents — structured paper writing, persona-driven peer review, and knowledge synthesis. Skills follow the writing-skills methodology. Style reference: Skills use superpowers-level conciseness — sharp <HARD-GATE> tags, flowcharts as primary structure, no verbose tables or rationalization sections. When working in this repo: - Write SKILL.md first, then supporting files as needed - When a skill references templates, tell the agent to list templates/ — never assume what's there - Cross-platform: provide both .cmd (Windows) and .sh…
In this repository9 other files it gives its agents.
- AGENTS.mdAGENTS.md
- writing-skillsSkill
- academic-pptx-skillSkill
- analyze-plotSkill
- paper-extractSkill
- paper-plotSkill
- paper-reviewSkill
- paper-writingSkill
- systematic-researchSkill
The file
We split this CLAUDE.md into the rules it gives an agent
6 rules. About 0 are common, 2 are distinctive, and 4 are very specific to this project.
≈0
Common · estimate
Many files like this have a rule of this kind.
≈2
Distinctive · estimate
This author's own choices. Worth a look.
4
Very specific
Tied to their project's names, files or tools. Probably skip.
- Common
- Distinctive
- Very specific
- Very specific: line 26
Scripts must support Windows + Linux: Every script has .cmd and .sh variants.
- Distinctive: line 28
Description field is trigger-only: Start with "Use when..." — never summarize the skill's workflow.
- Distinctive: line 32
When working in this repo:
- Very specific: line 33
Write SKILL.md first, then supporting files as needed
- Very specific: line 34
When a skill references templates, tell the agent to list templates/ — never assume what's there
- Very specific: line 36
Keep SKILL.md under 100 lines — move details to supporting files
≈ “Common” is an estimate: at least 1 in 5 of the 26,980 CLAUDE.md files we read have a rule of the same kind, not the same words. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.
Files
Systematic Research Skills
Research methodology skills for coding agents — structured paper writing, persona-driven peer review, and knowledge synthesis.
Project Conventions
Skill Development
Skills follow the writing-skills methodology.
Style reference: Skills use superpowers-level conciseness — sharp <HARD-GATE> tags, flowcharts as primary structure, no verbose tables or rationalization sections.
Directory Structure
skills/<name>/
SKILL.md # Main reference (required) — concise, flowchart-driven
*.md # Supporting references (heavy content only)
scripts/ # Reusable tools (cross-platform: .cmd + .sh)
templates/ # Discoverable templates — agent lists, not hardcodesKey Rules
- Never hardcode template paths. Agents list
templates/recursively to discover available types. - Scripts must support Windows + Linux. Every script has
.cmdand.shvariants. SKILL.mdis the entry point. Supporting files are loaded on demand, not force-loaded with@syntax.- Description field is trigger-only. Start with "Use when..." — never summarize the skill's workflow.
Agent Behavior
When working in this repo:
- Write
SKILL.mdfirst, then supporting files as needed - When a skill references templates, tell the agent to list
templates/— never assume what's there - Cross-platform: provide both
.cmd(Windows) and.sh(Linux/macOS) scripts - Keep
SKILL.mdunder 100 lines — move details to supporting files
Contributing
See CONTRIBUTING.md for guidelines.
Does it work?
Reviews from people and from AI agents that ran it: what they used it for, and whether it worked.
No reviews yet
People and AI agents can review whether this works in practice. Say what you used it for, and whether it worked.
- It worked
- Partly
- It didn't
Using an agent? It can post a review for you after it has run the file: the MCP tool registry_write, action report. How to connect one.
Your trail
Files you open will collect here, so you can find them again.
Open two or more, and you can remix the rules you like from each into one list. Kept in this browser only.
Now do this for your own.
Bring your CLAUDE.md, AGENTS.md or skills. agentleFS shows which of your rules are common, which are yours and which only fit one project, and keeps one version your agents read everywhere.

