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Loom is a self-hosted MCP server that gives AI agents shared long-term memory, document search with citations and a code index. It keeps its data in ClickHouse, with Postgres as an option for live memory and knowledge state, and serves it over MCP, HTTP and the Python and TypeScript SDKs. Start with docs/index.md (the map). To install Loom, a coding agent reads docs/getting-started/agent-setup.md and follows the agent-setup.txt each release attaches, with its pins filled in. To connect to a running…

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llms.txt
# ClickHouse Loom

> Loom is a self-hosted MCP server that gives AI agents shared long-term memory, document search with citations and a code index. It keeps its data in ClickHouse, with Postgres as an option for live memory and knowledge state, and serves it over MCP, HTTP and the Python and TypeScript SDKs.

Start with docs/index.md (the map). To install Loom, a coding agent reads docs/getting-started/agent-setup.md and follows the agent-setup.txt each release attaches, with its pins filled in. To connect to a running server: docs/getting-started/connect-a-coding-agent.md. To decide whether Loom fits: docs/getting-started/overview.md; for one need, docs/use-cases/index.md. Every operation's fields are in docs/reference/operations/.

## Getting started

- [Set up Loom with your coding agent](docs/getting-started/agent-setup.md): This page is for a coding agent, Claude Code or Codex, asked to install Loom on the machine it runs on and to prove that the install works.
- [Connect a coding agent](docs/getting-started/connect-a-coding-agent.md): This page connects Claude Code, Codex, Cursor or another MCP client to a running Loom server.
- [Evaluate Loom](docs/getting-started/evaluate.md): Evaluate the decision you need to make, not every harness in the repository.
- [Your first agent](docs/getting-started/first-agent.md): This tutorial builds a small agent with the Python SDK.
- [Configure models and API keys](docs/getting-started/models-and-keys.md): Your coding agent, Loom's internal LLM and Loom's embedding model are separate choices.
- [Overview](docs/getting-started/overview.md): Loom is a server that stores memory, documents, conversations, an entity graph and a code index for AI agents, as rows in ClickHouse, with Postgres as an option for live memory and knowledge state.
- [Quickstart](docs/getting-started/quickstart.md): This page boots Loom on a laptop and saves a first memory over HTTP, Python and MCP.
- [What's included](docs/getting-started/whats-included.md): This page lists Loom's main capabilities, self-hosted from the Apache-2.0 repository: one section per area, each row linked to the page that covers it.

## Use cases

- [Use cases](docs/use-cases/index.md): Each page answers one question people and agents ask when they look for a tool: what Loom does for that need and where to start.
- [Long-term and shared memory for AI agents](docs/use-cases/agent-memory.md): Loom is a self-hosted MCP server and HTTP API that gives AI agents long-term memory they share: a fact one agent saves in a session can be found by the next session, by another agent, or by a person at the dashboard.
- [Memory, recall, audit and erasure for autonomous agents](docs/use-cases/autonomous-agents.md): Loom gives autonomous agents memory they recall later, an audit record of who wrote what, and erasure of a scope everywhere Loom keeps it.
- [Code intelligence for C++, Python, TypeScript, Go, Rust, Java and infrastructure code](docs/use-cases/code-intelligence-by-language.md): Loom's code index answers a coding agent's structure questions in the languages a repository holds: where a symbol is defined, who calls it, and what a change touches.
- [A code index for coding agents](docs/use-cases/code-intelligence.md): Loom gives coding agents a shared index of your git repositories, served over MCP, so an agent asks a structure question and gets the lines that answer it instead of reading whole files.
- [Lower model cost for coding agents](docs/use-cases/coding-agent-cost.md): With the Loom plugin and code index, Claude Code answered questions about the ClickHouse codebase at 6% to 21% lower model cost than without it on all three measured question sets.
- [Document search and RAG for agents](docs/use-cases/document-search.md): Loom indexes your documents (Markdown and text, and PDF, `.docx` and `.pptx` files that its extractor service converts) and lets agents search them with citations over MCP, HTTP or the SDKs.
- [Shared context for multi-agent workflows](docs/use-cases/multi-agent.md): Loom gives the agents in a multi-agent workflow one place to share context: memory every agent in a namespace reads, task inboxes for handing work from one agent to another, and a record of decisions.
- [Agent runs, traces and PR history](docs/use-cases/runs-and-pr-history.md): Loom records the work coding agents do, as runs and searchable session conversations, and connects it to your code history.
- [Self-hosted agent memory on ClickHouse](docs/use-cases/self-hosted-clickhouse.md): Loom runs on your own infrastructure, with Docker or on Kubernetes with its Helm chart, and stores agent memory, documents, conversations and code indexes as tables in ClickHouse.

## Operations

- [Exporting usage to a data warehouse](docs/operations/analytics-export.md): `loom export-analytics` writes one UTC day of usage and a snapshot of the namespaces to an S3 bucket as Parquet files, one file per entity per day, for a data warehouse to load.
- [Backup and recovery](docs/operations/backup-and-recovery.md): A Loom backup is a ClickHouse backup, plus the document bucket while any catalog row names an object in it, and under the Postgres authority a backup of Postgres too.
- [ClickHouse Cloud and Managed Postgres](docs/operations/clickhouse-cloud.md): This guide runs Loom on Kubernetes over two managed services: ClickHouse Cloud for projections, vectors, history and analytics, and ClickHouse Managed Postgres as the memory authority.
- [Code index operations](docs/operations/code-index-operations.md): The code index runs only when an operator enables its workers and configures repositories.
- [Deployment](docs/operations/deployment.md): Loom is one server image plus ClickHouse (and Postgres, under `LOOM_STORAGE_AUTHORITY=postgres`), with the document extractor service as an image of its own (container images).
- [Kubernetes](docs/operations/kubernetes.md): `deploy/helm/loom` runs Loom as N identical replicas on Kubernetes: one Deployment of web pods over one ClickHouse service, each pod a full replica.
- [Maintenance](docs/operations/maintenance.md): Every command here is a `loom` subcommand; run it inside the container that has the deployment's environment (`docker exec loom-server loom …`, or `loom-workers` in a split deployment).
- [Monitoring](docs/operations/monitoring.md): This page says what to watch.
- [Copying a namespace to another Loom](docs/operations/okf-sync.md): A job inside the private network copies one namespace from a private Loom to a public one on a schedule: `loom export-okf` reads it from the private Loom, and `loom import-okf --prune` writes it to the public Loom.
- [Postgres memory authority](docs/operations/postgres.md): This guide sets up a Loom deployment whose live memory and knowledge document heads are held in Postgres, on ClickHouse Managed Postgres or on a self-hosted Postgres, and covers what to check before it serves.
- [Running N replicas](docs/operations/replicas.md): Every Loom process is a full replica.
- [Runtime settings](docs/operations/runtime-settings.md): Every setting is an environment variable `LOOM_<FIELD>` read at startup, and can also go in the YAML settings file (configuration reference).
- [Single sign-on (OIDC)](docs/operations/sso.md): Loom can hand the human sign-in to an OpenID Connect identity provider.
- [Supported versions](docs/operations/supported-versions.md): Releases N and N−1 get fixes, and an SDK at `X.Y` works with a server at `X.Y` or `X.(Y−1)`.
- [Troubleshooting](docs/operations/troubleshooting.md): Each entry gives a symptom, the check that confirms its cause, and the fix.
- [Upgrades](docs/operations/upgrades.md): An upgrade replaces the image (and the document extractor's, which holds no state) and applies the migrations the new build carries.

## Features

- [Code index freshness](docs/features/code-index/freshness.md): The index trails the repository: it indexes merged commits on a configured branch, pass by pass, and each tier advances its own watermark.
- [History, PRs and releases](docs/features/code-index/history-and-prs.md): These ops need merged-PR history; the `code_pr_history` worker is off by default (`LOOM_CODE_PR_HISTORY_ENABLED`).
- [Code operations](docs/features/code-index/operations.md): This page maps questions to `code.*` ops.
- [Code index](docs/features/code-index/overview.md): The code workers are off by default; a deployment turns them on per repository (repositories).
- [Adding repositories](docs/features/code-index/repositories.md): A fresh install indexes no repository.
- [Conversations and sessions](docs/features/conversations-and-sessions.md): Loom keeps three kinds of session state, each in its own plane:
- [The dashboard](docs/features/dashboard.md): The dashboard is a React single-page app the Loom server serves at its root URL.
- [Entity graph](docs/features/entity-graph.md): Entity communities are off by default (`LOOM_ENTITY_COMMUNITIES_ENABLED`).
- [Agent instructions](docs/features/integrations/agent-instructions.md): A short block in an agent's instruction file tells it when to load Loom's context, save a fact and use the code index instead of grepping or reading files.
- [Agent Substrate](docs/features/integrations/agent-substrate.md): Needs Agent Substrate v1.0.0 and Loom's Helm chart in one Kubernetes cluster: Substrate's egress gateway adds each agent's Loom token to its MCP calls.
- [Claude Code plugin](docs/features/integrations/claude-code.md): The `loom` plugin for Claude Code does three things in one install:
- [ClickStack and HyperDX](docs/features/integrations/clickstack.md): Loom always emits OpenTelemetry; the HyperDX sources, dashboards and the erasure step need configuring.
- [Codex plugin](docs/features/integrations/codex.md): The Codex plugin gives Codex the same Loom integration as Claude Code: MCP tools, hooks that capture the session and load a primer, and the code shunt.
- [Cursor](docs/features/integrations/cursor.md): Cursor gets Loom in two independent pieces:
- [Agent frameworks and orchestrators](docs/features/integrations/frameworks.md): The SDKs ship adapters that present Loom through a framework's own memory or retrieval interface.
- [The grep shim](docs/features/integrations/grep-shim.md): Needs Node 18 or later, a viewer token, and a repository in the code index.
- [Integrations](docs/features/integrations/index.md): Loom on a bare ClickHouse service is a complete deployment.
- [Langfuse](docs/features/integrations/langfuse.md): Needs `LOOM_LANGFUSE_URL` and `LOOM_LANGFUSE_ADMIN_TOKEN`; nothing is sent until both are set.
- [LibreChat](docs/features/integrations/librechat.md): Needs LibreChat v0.8.8 (MIT), a Loom server that serves the assistant toolset, and one Loom `viewer` token per person.
- [Connecting an MCP client](docs/features/integrations/mcp-clients.md): Loom serves its operations as MCP tools at `<loom>/mcp`.
- [OKF bundles](docs/features/integrations/okf.md): A namespace can be rendered as an OKF (Open Knowledge Format) v0.2 bundle: one Markdown file per memory with YAML frontmatter, an `index.md` per directory listing each concept with a one-line description, and a `log.md` of changes.
- [VS Code](docs/features/integrations/vscode.md): VS Code's agent mode (GitHub Copilot) connects to Loom as a remote MCP server over streamable HTTP.
- [Knowledge documents](docs/features/knowledge.md): A knowledge document is text an agent looks things up in: a runbook, a specification, a README.
- [Conflicts and refusal](docs/features/memory/conflicts-and-refusal.md): Every memory write is judged against the facts the namespace already holds.
- [Extraction from transcripts](docs/features/memory/extraction.md): `memory.set_from_messages` takes a transcript and the server decides what in it is durable.
- [History and provenance](docs/features/memory/history-and-provenance.md): Every write to memory makes a new version; nothing is edited in place.
- [Procedures and learnings](docs/features/memory/procedures-and-learnings.md): This page covers what an agent learns from doing, as opposed to facts it is told: procedures ("how to do X", a graph of steps learned from reported runs), reflections (lessons written at the end of a run) and learnings (a review queue of…
- [Retention and erasure](docs/features/memory/retention-and-erasure.md): Loom deletes no memory unless its writer, the namespace owner or the operator asks.
- [Search and ask](docs/features/memory/search-and-ask.md): `memory.search` returns ranked hits for the agent to read.
- [Working memory and profiles](docs/features/memory/working-memory-and-profiles.md): Two planes hold text an agent is given every time instead of finding it by search:
- [Writing memory](docs/features/memory/writing.md): A memory is one claim stored under a key in a namespace.
- [Namespaces and sharing](docs/features/namespaces-and-sharing.md): A namespace is the unit of isolation and sharing inside an org.
- [Audit log](docs/features/observability/audit.md): Audit rows, the `audit_verifier` worker and the checkpoint chain are on by default.
- [Cost and usage](docs/features/observability/cost-and-usage.md): Loom records every upstream dollar it spends on embedding and LLM calls against the operation that spent it, in the per-operation ledger `loom.agent_events`.
- [Telemetry](docs/features/observability/telemetry.md): Loom reports on itself in three layers:
- [Runs](docs/features/runs.md): A run is one execution of a task, such as "triage issue 1234".
- [Tasks, decisions and policies](docs/features/tasks-and-decisions.md): Three planes sit beside memory for coordination between agents.
- [Tracker plane](docs/features/tracker/overview.md): Nothing serves until `LOOM_TRACKER_ORG` is set and a source is registered.
- [Tracker record contract](docs/features/tracker/record-contract.md): The `tracker.*` ops, and the tracker legs of `code.*` and `loom_search`, read a team's issues, pull requests and incidents live from the team's own ClickHouse with a read-only credential.
- [Unified search and context packs](docs/features/unified-search.md): `loom_search` searches memory, profile, knowledge and past conversations across the caller's namespaces in one round trip.

## Reference

- [Reference](docs/reference/index.md): Reference pages say what exists and what each option means.
- [CLI reference](docs/reference/cli.md): `loom` is the one command-line entry point for running, maintaining and connecting to a Loom deployment.
- [Configuration reference](docs/reference/configuration.md): Every setting is declared in one file, `server/settings/catalog.py`, and is an environment variable `LOOM_<FIELD>` read at startup into `server.settings.settings`.
- [Environment variables reference](docs/reference/environment.md): Almost everything Loom is configured with is a settings field: the environment variable `LOOM_<FIELD>` of a field on `server.settings.Settings`, listed with its default and meaning in the generated configuration reference.
- [Errors reference](docs/reference/errors.md): Every refusal Loom makes carries a stable, upper-case `code`.
- [Extractor contract](docs/reference/extractor-contract.md): An extractor is an HTTP service the Loom server sends an original file to and gets its extraction artifact back from.
- [HTTP API reference](docs/reference/http-api.md): Every Loom operation is one HTTP endpoint, `POST /v1/<operation>`, generated from the operation registry in `server/operations/` (`server/transport/http.py`, `build_router`).
- [MCP reference](docs/reference/mcp.md): Loom serves its operations as MCP tools at `<loom>/mcp`.
- [Operations reference](docs/reference/operations.md): An operation (op) is one named unit of work on the Loom wire, such as `memory.set` or `code.search`.
- [Python SDK reference](docs/reference/python-sdk.md): The Python SDK (`clickhouse-loom`, source in `sdk/python/loom/`) is an async client over the HTTP API.
- [Schema reference](docs/reference/schema.md): Loom keeps its ClickHouse state in the `loom` and `loom_telemetry` databases.
- [SQL surface](docs/reference/sql-surface.md): The SQL surface is a set of read-only ClickHouse views over a tenant's memories, memory history, conversations and request ledger.
- [Status of Loom's surfaces](docs/reference/status.md): This page counts each op group's stable ops, names its experimental ones, and lists every boolean setting that loads false, so a caller can tell, before relying on an op or a switch, whether it is stable and whether it is on by default.
- [TypeScript SDK reference](docs/reference/typescript-sdk.md): The TypeScript SDK (`@clickhouse/loom`, source in `sdk/typescript/src/`) is a typed client over the HTTP API.
- [Workers reference](docs/reference/workers.md): A worker is a supervised background loop: one pass function run on an interval by the worker supervisor.

## Concepts

- [Identities and namespaces](docs/concepts/identities-and-namespaces.md): Loom answers two questions on every call: whose row is this (the identity tuple, plus two columns the server stamps), and may this caller touch it (the token, the namespace's grants and its classification).
- [Memory](docs/concepts/memory.md): A memory is one claim an agent should find again: "deploys happen on Tuesdays", "the payments team owns the billing service".
- [Retrieval and ranking](docs/concepts/retrieval-and-ranking.md): This page explains how `memory.search` finds rows.

## Guides

- [Integrate Loom into an agent](docs/guides/agent-integration.md): This guide covers what an agent sends to Loom and how it reads the answers: the client surface, the identity, what to write, and how to read.
- [Debug a request](docs/guides/debugging.md): Loom tags everything one request does with the same id, so tracing a request is a join.
- [Customize the extraction pipeline](docs/guides/extraction-pipeline.md): `memory.set_from_messages` runs its transcript through an ordered list of steps that share one state.
- [Headless bots](docs/guides/headless-bots.md): A headless bot runs with no person to paste a token, notice a silent failure or say "remember this".
- [Import ClickGap memory](docs/guides/importing-clickgap-memory.md): `loom import-clickgap` loads one SQLite export shape, a ClickGap `lessons` store, into a Loom namespace; skip this page unless you have such an export.
- [Store an investigation agent's memory](docs/guides/investigation-agent-memory.md): An investigation agent produces several kinds of state, and Loom has a plane for each.
- [Optimize a namespace from its audit](docs/guides/optimize-namespace.md): A writer that uses `memory.set` as an object store (JSON blobs under hash keys, leases as memories, documents as claims) leaves every table consistent and recall useless.
- [Tune Loom's performance](docs/guides/performance-tuning.md): Every lever on this page is a setting or a request field.
- [Query Loom from Postgres](docs/guides/query-from-postgres.md): This guide reads a tenant's memories, conversations and usage from the org's own Postgres, where they can be joined with the application's tables.
- [Teaching with Loom](docs/guides/teaching.md): Loom can serve as the lab environment for a course on AI agents, information retrieval, databases or software engineering.
- [Tokens and grants](docs/guides/tokens-and-grants.md): Every call carries one JWT.
- [Trace and resume long agent runs](docs/guides/trace-and-resume.md): A long run (process 300 files, crawl a repository, work through a plan) can stop part way: a crash, a full context window, a deploy, a pause.
- [Use Loom without the dashboard](docs/guides/without-the-dashboard.md): Everything the `/me` dashboard does can be done from a terminal, a script or an agent's shell.

## Architecture

- [Assistant design](docs/architecture/assistant.md): This page is the design of Loom's assistant, which answers questions about what a namespace holds and how it is used, with a citation for every claim.
- [Cells](docs/architecture/cells.md): A deployment's memory can outgrow one Postgres primary and one ClickHouse service, and an org may want its memory in services of its own.
- [ClickHouse](docs/architecture/clickhouse.md): Durable Loom state lives in ClickHouse, except document bytes in an optional S3-compatible bucket and, under the Postgres memory authority, the Postgres tables: live memory, knowledge state and the records beside them.
- [Code index architecture](docs/architecture/code-index-architecture.md): This page is the inside view of the code index: how files become chunks, symbols and edges, and how the two tiers stay current.
- [Document extraction](docs/architecture/document-extraction.md): An uploaded original is parsed into one shape, the extraction artifact, by an extractor service: a separate process with its own dependencies, never the Loom server.
- [Document sources](docs/architecture/document-sources.md): A document source pulls files from a document store (a shared-folder store, a page store, a project tracker, a meeting store) into a namespace's documents and keeps them in step, on any shared namespace or collection.
- [Failure and recovery](docs/architecture/failure-and-recovery.md): The primary write and every access decision fail closed.
- [Knowledge gaps](docs/architecture/knowledge-gaps.md): Loom records the searches that found nothing a caller could use and groups them, once a day, into knowledge gaps: the questions several people asked that the namespace's memory and documents do not answer.
- [LLM and embedding architecture](docs/architecture/llm-architecture.md): Loom has two pluggable providers: an embedder (`server/embedding/`) that turns text into vectors, and an LLM client (`server/llm/`) that completes prompts.
- [Memory architecture](docs/architecture/memory-architecture.md): The memory plane stores facts in `loom.memory`, makes them searchable through `loom.memory_embeddings`, and derives evidence, chunks, graph rows and statistics from them.
- [Provider reconfiguration](docs/architecture/provider-reconfiguration.md): Loom stores dashboard model configuration as encrypted, versioned rows in `loom.provider_configuration`.
- [Rolling upgrades: builds N-1 and N side by side](docs/architecture/rolling-upgrades.md): Every Loom process is a full replica behind one URL, and an upgrade replaces them one at a time.
- [Security](docs/architecture/security.md): Loom separates tenants by columns: every row carries the identity tuple, and every read filters on it.
- [Server layout](docs/architecture/server-layout.md): `server/` is organised by domain.
- [Sharing knowledge](docs/architecture/sharing.md): A collection is a namespace that only grants open.
- [Storage authority: Postgres for live memory, ClickHouse for search](docs/architecture/storage-authority.md): Loom runs with one of two memory authorities, chosen per deployment by `LOOM_STORAGE_AUTHORITY`.
- [Storage layout: which store holds each table, and why](docs/architecture/storage-layout.md): Each Loom table belongs in Postgres or ClickHouse by how it is read and written; this page places every table, with the wave that moves it.
- [System overview](docs/architecture/system-overview.md): Loom is a Python server (a FastAPI application plus a supervisor of background workers) and ClickHouse, with Postgres as an option for live memory and knowledge state.

## Benchmarks

- [Adding a benchmark case, dataset or suite](docs/benchmarks/adding-a-case.md): The committed sets are small (set sizes), so a new case is the cheapest way to improve the suite.
- [Benchmark coverage](docs/benchmarks/coverage.md): This matrix shows which parts of Loom's memory, knowledge and code flows have a reproducible public measurement.
- [Benchmark methodology](docs/benchmarks/methodology.md): This page covers what the harnesses compute, how a delta is judged against noise, when two numbers compare, and where the numbers are biased.
- [Benchmarks overview](docs/benchmarks/overview.md): Ranking levers, similarity gates, cache thresholds and extraction prompts change behaviour that a unit test cannot judge.
- [Benchmark results](docs/benchmarks/results.md): This page lists only numbers that a committed file reproduces.
- [Running the benchmarks](docs/benchmarks/running.md): Run every command from the repository root with the checkout's interpreter and the root first on `PYTHONPATH`:
- [Skill eval](docs/benchmarks/skill-eval.md): The skill eval grades the `loom-memory` skill by the namespace an agent leaves behind.

## Development

- [Add a ClickHouse table or column](docs/development/adding-a-table.md): Loom's ClickHouse state is tables in the `loom` and `loom_telemetry` databases; under the Postgres memory authority, live memory, knowledge state and the records beside them are in Postgres.
- [Add a background worker](docs/development/adding-a-worker.md): A worker is a row in `server/workers/registry.py` (`_WORKERS`) plus a module with one pass function.
- [Add an operation](docs/development/adding-an-operation.md): An operation is declared once, in the registry.
- [Add language support to the code index](docs/development/adding-language-support.md): The code index reads a repository in two tiers:
- [Code generation](docs/development/code-generation.md): Several files in the repository are derived from the code: the SDKs' operation tables and wire types, the reference pages, the Codex plugin's copies, the op reach manifest, the schema dump.
- [Curation loop design](docs/development/curation-loop-design.md): This page is the design of the curation loop, which turns what people ask into definitions an organization stands behind.
- [Dashboard design](docs/development/dashboard-design.md): The dashboard at `/` is built on ClickHouse's design system, Click UI, in its dark theme.
- [Documentation style guide](docs/development/documentation-style.md): How to place a new page in the right section, write it in the house style, and pass the documentation checks on the first push.
- [Extend Loom](docs/development/extending-loom.md): Loom has one registry per kind of thing: operations, workers, settings, providers, language lanes, extraction steps and tracker sources.
- [Local development](docs/development/local-development.md): This page sets up a checkout for working on Loom's code.
- [Migrations](docs/development/migrations.md): This page holds the rules for writing a migration.
- [Release process](docs/development/release-process.md): Loom follows SemVer: the server, both SDKs, the web app, the root skills (`loom-code`, `loom`) and the Gemini CLI extension share one version `X.Y.Z`.
- [Repository guide](docs/development/repository-guide.md): What every top-level directory holds, where a concern lives inside `server/`, the order to read the code in, and the conventions a pull request fails without.
- [Testing](docs/development/testing.md): Which suite a test belongs in, what each suite needs to run, how tests skip when their environment is missing, which gates CI enforces, and how to regenerate what they pin.

## Optional

- [Glossary](docs/glossary.md): Loom's terms, alphabetically, each defined once.
- [Frequently asked questions](docs/faq.md): Short answers to the first questions people ask.

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