string-database
Skill47 starsChanged 48 days agoAGPL-3.0View on GitHub
Query the STRING database for protein-protein interactions (PPIs), functional enrichment, and homology. Use when the user asks about interactions between specific proteins, interaction evidence, confidence scores, protein interaction partners, or pathway enrichments.
11 other projects use a version of this, 2 of them edited.
Adopted by
Most recently taken up by
- BrightGold70/skillstheir own version, first seen Nov 8, 2026
- 1stANUNNAKI/majlisedited, first seen Nov 8, 2026
- MarieLynneBlock/arcanum-artifextheir own version, first seen Nov 1, 2026
- davidanthonyn/claude-skillstheir own version, first seen Oct 20, 2026
- Osmosy/vector-geneword for word, first seen Oct 13, 2026
- wu-yc/LabClawtheir own version, first seen Oct 8, 2026
Used with
Projects with it also use ena-database, gwas-database and 10 more.
Other files people use alongside this one.
Files found in the same public projects as a version of this one, more often than they turn up anywhere else. Each project counts once, large collections count for less, and this file's own repository is left out.
garri333Skillena-database
Access European Nucleotide Archive via API/FTP. Retrieve DNA/RNA sequences, raw reads (FASTQ), genome assemblies by accession, for genomics and bioinformatics pipelines. Supports multiple formats.
Also in 6 projects that use this
- garri333Skill
gwas-database
Query NHGRI-EBI GWAS Catalog for SNP-trait associations. Search variants by rs ID, disease/trait, gene, retrieve p-values and summary statistics, for genetic epidemiology and polygenic risk scores.
Also in 6 projects that use this
yf8578Skillusfiscaldata
Query the U.S. Treasury Fiscal Data API for federal financial data including national debt, government spending, revenue, interest rates, exchange rates, and savings bonds. Access 54 datasets and 182 data tables with no API key required. Use when working with U.S. federal fiscal data, national debt tracking (Debt to the Penny), Daily Treasury Statements, Monthly Treasury Statements, Treasury securities auctions, interest rates on Treasury securities, foreign exchange rates, savings bonds, or any U.S. government financial statistics.
Also in 5 projects that use this
tondevrelSkillsimpy
A process-based discrete-event simulation framework. Use for modeling queuing systems, supply chains, manufacturing processes, network simulation, project management, and any system where events occur at specific points in time. Load when working with discrete event simulation, process modeling, resource allocation, virtual time, simpy.Environment, simpy.Resource, or event-driven simulation.
Also in 6 projects that use this
- +8 more from garri333
Other versions11 projects use a version of this.
Word for word · 2
- google-deepmind/science-skills★ 3.4k100% same
- Osmosy/vector-gene★ 0100% same
Edited · 2
- 1stANUNNAKI/majlis★ 293% same
- uppifyagency/boilerplate-saas-2026★ 197% same
Wrote their own version · 7
- wu-yc/LabClaw★ 1.1ksame name
- LeonChaoX/qinyan-academic-skills★ 910same name
- qinyan-ai/qinyan-academic-skills★ 80same name
- MarieLynneBlock/arcanum-artifex★ 4same name
- BrightGold70/skills★ 1same name
- yf8578/claude-skills-collection★ 1same name
- davidanthonyn/claude-skills★ 0same name
How matches are found. Word for word: the exact same text. Edited: shares passages with this file (“99% same” means 99% of its five-word phrases also appear here; 10% or more counts). Their own version: similar meaning, or, weakest, the same name. We can’t tell which project had it first. Projects are counted among the 200 most-starred candidates, and mentions are links to the repository we found, up to 50 per site, so both counts are a floor.
In this repository15 other files it gives its agents.
- AGENTS.mdAGENTS.md
- CLAUDE.mdCLAUDE.md
- a11ySkill
- alphafold-database-fetch-and-analyzeSkill
- chembl-databaseSkill
- credentialsSkill
- foldseek-structural-searchSkill
- human-protein-atlas-databaseSkill
- interpro-databaseSkill
- movimiento-movilSkill
- opentargets-databaseSkill
- pdb-databaseSkill
- pubchem-databaseSkill
- reactome-databaseSkill
- uniprot-databaseSkill
The file
We split this skill into the rules it gives an agent
6 rules. 0 are common, 2 are distinctive, and 4 are very specific to this project.
0
Common
Most of the 9 edited versions we read keep these.
2
Distinctive
This author's own choices. Worth a look.
4
Very specific
Tied to their project's names, files or tools. Probably skip.
Licensed with conditions — read it at the source. We count its rules but don't quote them. Read them on GitHub.
“Common” is measured: kept by at least 6 in 10 of the 9 edited versions of this file we could read. “Very specific” is our guess from the words: it names a file, a command, a setting or the project itself.
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